Amber Benchmarks
PRIMEPOWER HPC2500
32 x 1.3 GHz SPARC64™ V processors, 270MHz interface bus clock, 64 GB of shared memory, Solaris 8, Fujitsu Fortran Compiler Driver Version 5.3 P-id: 912528-02
Rt-Polymerase, 141,154 atoms, 100 MD steps, CPU time units for various number of processors
| CPU |
1 |
2 |
4 |
8 |
| Sander 7 |
1.00 |
0.51 |
0.28 |
0.16 |
| Sander 8 |
0.85 |
0.45 |
0.25 |
0.16 |
| Pmemd |
0.70 |
0.37 |
0.19 |
0.11 |
JAC, 23,558 atoms, 1000 MD steps, CPU time units for various number of processors
| CPU |
1 |
2 |
4 |
8 |
| Sander 7 |
1.00 |
0.50 |
0.27 |
0.15 |
| Sander 8 |
0.58 |
0.30 |
0.16 |
0.09 |
| Pmemd |
0.52 |
0.27 |
0.14 |
0.07 |
Gb-mb, 2,492 atoms, 1000 MD steps, CPU time units for various number of processors
| CPU |
1 |
2 |
4 |
8 |
| Sander 7 |
1.00 |
0.50 |
0.25 |
0.13 |
| Sander 8 |
0.70 |
0.35 |
0.18 |
0.09 |
