Hierarchy For All Packages

Package Hierarchies:

cct, cct.adf, cct.amber, cct.applets, cct.awtdialogs, cct.chart, cct.chart.jfreechart, cct.cprocessor, cct.database, cct.dialogs, cct.gamess, cct.gaussian, cct.gaussian.java3d, cct.gaussian.ui, cct.grid, cct.grid.ui, cct.grid.ui.gaussian, cct.gromacs, cct.gulp, cct.help, cct.interfaces, cct.j3d, cct.j3d.ui, cct.math, cct.math.polyg, cct.math.polyg.java3d, cct.mdl, cct.modelling, cct.modelling.ui, cct.mopac, cct.oogl, cct.oogl.java3d, cct.oogl.ui, cct.pdb, cct.pdb.ui, cct.poly, cct.povray, cct.qchem, cct.resources, cct.resources.images, cct.sff, cct.siesta, cct.siesta.ui, cct.ssh, cct.tools, cct.tools.filebrowser, cct.tools.ui, cct.tripos, cct.vasp, cct.vasp.ui, cct.vecmath

Class Hierarchy

• java.lang.Object
  • java.util.AbstractCollection<E> (implements java.util.Collection<E>)
    • java.util.AbstractList<E> (implements java.util.List<E>)
      • java.util.ArrayList<E> (implements java.lang.Cloneable, java.util.List<E>, java.util.RandomAccess, java.io.Serializable)
        • cct.modelling.BondsArray
        • cct.poly.CENTERLIST
        • cct.poly.CORNERLIST
        • cct.poly.EDGELIST
        • cct.gaussian.GaussianMolecule
        • cct.poly.INTLIST
        • cct.poly.INTLISTS
        • cct.modelling.MolecularGeometry
        • cct.modelling.Monomer (implements cct.interfaces.MonomerInterface)
  • java.util.AbstractMap<K,V> (implements java.util.Map<K,V>)
    • java.util.HashMap<K,V> (implements java.lang.Cloneable, java.util.Map<K,V>, java.io.Serializable)
      • cct.grid.CheckPoint (implements cct.grid.CheckPointInterface)
      • cct.grid.JobDescription
  • javax.swing.table.AbstractTableModel (implements java.io.Serializable, javax.swing.table.TableModel)
    • cct.tools.filebrowser.FileBrowserTableModel
    • cct.chart.jfreechart.JFreeChartPanel.ChartTableModel (implements javax.swing.table.TableModel)
    • cct.grid.ui.JobStatusTableModel
    • cct.tools.filebrowser.TableSorter
    • cct.modelling.ui.VibrationsControlPanel.ChartTableModel (implements javax.swing.table.TableModel)
  • cct.adf.ADF
  • cct.adf.ADFAtom
  • cct.adf.ADFFrequency
  • cct.adf.ADFFrequency.ADFVector
  • cct.adf.ADFOutput (implements cct.interfaces.OutputResultsInterface, cct.modelling.StructureManagerInterface)
  • cct.adf.ADFOutputSection
  • cct.adf.ADFSnapshot
  • cct.amber.AmberLib
  • cct.amber.AmberPrep
  • cct.amber.AmberPrmtop
  • cct.amber.AmberSubmitMenuHandler (implements java.awt.event.ActionListener, java.awt.event.ItemListener)
  • cct.amber.AmberUtilities
  • cct.math.Amoeba
  • cct.modelling.AngleBend
  • cct.modelling.AngleBendEnergy
  • cct.modelling.AngleBendsArray
  • cct.sff.AngleParam
  • cct.modelling.AtomGenerator
  • cct.modelling.AtomGeometry
    • cct.modelling.CCTAtomTypes (implements java.util.Comparator<T>)
  • cct.modelling.AtomsArray
  • cct.modelling.AtomTypeDef (implements cct.modelling.AtomProperties)
  • cct.modelling.AtomTypes (implements cct.modelling.AtomProperties)
  • cct.modelling.BasicFragment (implements java.lang.Comparable<T>)
  • cct.modelling.BasicFragment.CarbonDivalentStr
  • cct.modelling.Bond (implements cct.interfaces.BondInterface)
  • cct.sff.BondParam
  • cct.modelling.BondStretchEnergy
  • cct.modelling.BondStretchPairs
  • cct.modelling.ui.CalcButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.tools.CCTParserEnum (implements java.lang.Comparable<T>)
  • cct.j3d.CellViewManager (implements cct.interfaces.CellViewManagerInterface)
  • cct.poly.CENTERELEMENT
  • cct.chart.ChartReference
  • cct.grid.ui.CheckPointStatus (implements cct.grid.FileTransferInterface, cct.grid.JobStatusInterface)
  • cct.grid.ui.CheckPointStatus.FTransferWithProgress (implements cct.grid.ui.ThreadInterface)
  • cct.modelling.ChemicalElements
    • cct.j3d.ChemicalElementsColors
  • cct.siesta.ChemicalSpeciesLabel
  • cct.oogl.Color
  • cct.j3d.color3fPalette
  • cct.j3d.ColorRangeScheme
  • cct.cprocessor.CommandProcessor
  • java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    • java.awt.Canvas (implements javax.accessibility.Accessible)
      • javax.media.j3d.Canvas3D
        • cct.j3d.OffScreenCanvas3D
    • java.awt.Container
      • javax.swing.JComponent (implements java.io.Serializable)
        • javax.swing.JFileChooser (implements javax.accessibility.Accessible)
          • cct.tools.ui.FileChooserDialog
        • javax.swing.JLabel (implements javax.accessibility.Accessible, javax.swing.SwingConstants)
          • cct.tools.filebrowser.FileNameRenderer (implements javax.swing.table.TableCellRenderer)
          • cct.tools.filebrowser.FileSizeRenderer (implements javax.swing.table.TableCellRenderer)
          • cct.tools.filebrowser.FileTransferFrame.HostComboBoxRenderer (implements javax.swing.ListCellRenderer)
          • cct.tools.filebrowser.UnsignedInteger64Renderer (implements javax.swing.table.TableCellRenderer)
        • javax.swing.JPanel (implements javax.accessibility.Accessible)
          • cct.dialogs.AnimationPanel (implements java.awt.event.ActionListener, cct.modelling.TrajectoryClientInterface)
          • cct.j3d.ui.ColorGradientPanel
          • cct.j3d.ui.ControlColorGradientPanel
          • cct.tools.filebrowser.FileBrowserPanel (implements cct.interfaces.FileBrowserGUIInterface)
          • cct.tools.filebrowser.FilePropertiesPanel
          • cct.tools.filebrowser.FileTransferPanel
          • cct.tools.ui.FontSelectorPanel (implements javax.swing.event.ChangeListener, java.awt.event.ItemListener)
          • cct.dialogs.JAtomSelectionPanel
          • cct.dialogs.JAtomTypesPanel
          • cct.dialogs.JElementsPanel (implements java.awt.event.ActionListener, java.awt.event.ItemListener)
          • cct.tools.filebrowser.JFileBrowserPanel (implements cct.interfaces.FileBrowserGUIInterface)
          • cct.chart.jfreechart.JFreeChartPanel (implements java.awt.event.ActionListener, org.jfree.chart.event.ChartChangeListener, org.jfree.chart.event.ChartProgressListener)
          • cct.dialogs.JModifyAtomPanel
          • cct.grid.ui.JobStatusPanel (implements java.awt.event.ActionListener, java.awt.event.MouseListener, java.awt.event.MouseMotionListener)
          • cct.grid.ui.JobStatusPopupPanel
          • cct.tools.ui.JPEGOptionsPanel
          • cct.dialogs.JQuickSelectionPanel
          • cct.dialogs.JSelectionRulePanel
          • cct.dialogs.JSelectionTypePanel
          • cct.dialogs.JSpecialSelectionPanel
          • cct.dialogs.JThreeButtonsPanel
          • cct.tools.MemoryMonitor
          • cct.tools.MemoryMonitor.Surface (implements java.lang.Runnable)
          • cct.grid.ui.NoSchedulerPanel (implements cct.grid.SchedulerInterface)
          • cct.grid.ui.PBS_Panel
          • cct.grid.ui.PBSPanel (implements cct.grid.SchedulerInterface)
          • cct.pdb.ui.PDBBankFormPanel
          • cct.tools.filebrowser.PermissionsPanel (implements java.awt.event.ItemListener)
          • cct.j3d.PopupPanel
          • cct.tools.ui.PostMessagePanel
          • cct.grid.ui.ResourcesPanel (implements cct.grid.ResourcesProviderInterface)
          • cct.amber.Sander9JobPanel
          • cct.siesta.ui.SiestaPanel
          • cct.gaussian.ui.SimpleG03EditorPanel
          • cct.ssh.SSHPanel (implements cct.interfaces.FileChooserInterface)
          • cct.grid.ui.gaussian.SubmitGaussianPanel (implements cct.grid.ClientProgramInterface)
          • cct.grid.ui.gaussian.SubmitGaussPanel
          • cct.grid.TaskProviderPanel
          • cct.dialogs.TrajectoriesManagerPanel
          • cct.j3d.ui.VerticesPropertyPanel (implements cct.j3d.ui.MappedSurfaceInterface)
          • cct.modelling.ui.VibrationsControlPanel (implements javax.swing.event.ListSelectionListener)
          • cct.dialogs.ViewPeriodicImagePanel (implements javax.swing.event.ChangeListener)
        • javax.swing.JScrollPane (implements javax.accessibility.Accessible, javax.swing.ScrollPaneConstants)
          • cct.help.HelpPanel (implements javax.swing.event.HyperlinkListener)
          • cct.gaussian.ui.Link0Panel
          • cct.gaussian.ui.MoleculeSpecsPanel
          • cct.gaussian.ui.RouteSectionPanel
          • cct.gaussian.ui.TitleSectionPanel
        • javax.swing.JTabbedPane (implements javax.accessibility.Accessible, java.io.Serializable, javax.swing.SwingConstants)
          • cct.dialogs.J3DTabbedWorld (implements cct.interfaces.MoleculeRendererInterface)
        • javax.swing.text.JTextComponent (implements javax.accessibility.Accessible, javax.swing.Scrollable)
          • javax.swing.JTextField (implements javax.swing.SwingConstants)
            • cct.tools.filebrowser.FileTransferFrame.HostEditor (implements java.awt.event.ActionListener, javax.swing.ComboBoxEditor)
      • java.awt.Panel (implements javax.accessibility.Accessible)
        • java.applet.Applet
          • cct.amber.AmberApplet
          • cct.applets.viewer (implements java.awt.event.ActionListener, java.awt.event.MouseListener, java.awt.event.MouseMotionListener)
      • java.awt.Window (implements javax.accessibility.Accessible)
        • java.awt.Dialog
          • cct.awtdialogs.AddNewMethodDialog (implements java.awt.event.ActionListener, java.awt.event.ItemListener, java.awt.event.KeyListener)
          • cct.awtdialogs.AddNewMoleculeDialog (implements java.awt.event.ActionListener, java.awt.event.ItemListener)
          • cct.awtdialogs.AddNewStructureDialog (implements java.awt.event.ActionListener)
          • cct.awtdialogs.AtomLabelsDialog (implements java.awt.event.ActionListener, java.awt.event.ItemListener)
          • cct.awtdialogs.AtomTypeDialog (implements java.awt.event.ActionListener, java.awt.event.ItemListener)
          • cct.database.ChemistryDatabaseDialog (implements java.awt.event.ActionListener, java.awt.event.ItemListener)
          • cct.awtdialogs.ConnectSQLServer (implements java.awt.event.ActionListener)
          • cct.awtdialogs.GaussianCalcSetupDialog (implements java.awt.event.ActionListener, java.awt.event.ItemListener)
          • cct.awtdialogs.GeometrySelectDialog (implements java.awt.event.ActionListener, java.awt.event.ItemListener)
          • javax.swing.JDialog (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • cct.dialogs.AddMoleculeDialog
            • cct.amber.Amber9JobDialog
            • cct.tools.filebrowser.ConfirmFileOverwriteDialog (implements java.awt.event.ActionListener)
            • cct.tools.filebrowser.ConnectHostDialog (implements java.awt.event.ActionListener)
            • cct.tools.ui.DoubleSpinnerDialog (implements java.awt.event.ActionListener)
            • cct.tools.filebrowser.EditHostsDialog
            • cct.grid.ui.EditScriptDialog (implements java.awt.event.ActionListener)
            • cct.tools.filebrowser.FileChooserDialog (implements java.awt.event.ActionListener)
            • cct.tools.filebrowser.FilePropertiesDialog (implements java.awt.event.ActionListener)
            • cct.tools.ui.FontSelectorDialog (implements java.awt.event.ActionListener)
            • cct.dialogs.Frame1_AboutBox (implements java.awt.event.ActionListener)
            • cct.gaussian.ui.GaussianInputEditorFrame_AboutBox (implements java.awt.event.ActionListener)
            • cct.dialogs.JAtomSelectionDialog (implements cct.modelling.OperationsOnAtoms)
            • cct.dialogs.JChoiceDialog (implements java.awt.event.ActionListener)
            • cct.dialogs.JEditorFrame_AboutBox (implements java.awt.event.ActionListener)
            • cct.dialogs.JModifyAngleDialog (implements cct.modelling.OperationsOnAtoms)
            • cct.dialogs.JModifyAtomDialog (implements java.awt.event.ActionListener)
            • cct.dialogs.JModifyBondDialog
            • cct.dialogs.JModifyTorsionDialog (implements cct.modelling.OperationsOnAtoms)
            • cct.grid.ui.JobStatusDialog
            • cct.tools.ui.JPEGOptionsDialog
            • cct.dialogs.JSelectAtomTypesDialog
            • cct.dialogs.JSelectMonomersDialog
            • cct.dialogs.JSelectSubstructureDialog
            • cct.modelling.ui.JSetupEnergyDialog
            • cct.dialogs.JSimpleAtomSelectionDialog (implements java.awt.event.ActionListener)
            • cct.dialogs.JSolvateShellDialog
            • cct.modelling.ui.MinimizationProgressDialog
            • cct.dialogs.MoleculeSelectorDialog
            • cct.oogl.ui.OOGLViewerFrame_AboutBox (implements java.awt.event.ActionListener)
            • cct.tools.ui.PostMessageDialog (implements java.awt.event.ActionListener)
            • cct.grid.ui.ProgressDialog
            • cct.vasp.ui.ReadPoscarDialog
            • cct.amber.ReadPrmtopDialog
            • cct.amber.Sander8Frame_AboutBox (implements java.awt.event.ActionListener)
            • cct.amber.Sander9Frame_AboutBox (implements java.awt.event.ActionListener)
            • cct.gaussian.ui.SaveG03GJFDialog
            • cct.siesta.ui.SaveSiestaInputDialog
            • cct.dialogs.SaveXYZDialog
            • cct.tools.ui.SelectFromListDialog (implements java.awt.event.ActionListener)
            • cct.dialogs.SelectPropShowDialog
            • cct.gaussian.SelectPropShowDialog
            • cct.tools.filebrowser.SFTPFileChooserDialog (implements java.awt.event.ActionListener, cct.tools.filebrowser.SelectionInfoInterface, cct.tools.filebrowser.ShadowClientInterface)
            • cct.grid.ui.gaussian.SubmitGaussianDialog (implements cct.grid.ScriptSubmitterDialogInterface)
            • cct.grid.ui.gaussian.SubmitGaussianDialogNew (implements cct.grid.ScriptSubmitterDialogInterface)
            • cct.grid.ui.gaussian.SubmitGaussianFrame_AboutBox (implements java.awt.event.ActionListener)
            • cct.grid.ui.SubmitTaskDialog (implements cct.grid.ScriptSubmitterDialogInterface)
            • cct.dialogs.TrajectoryAnalysisDialog (implements cct.modelling.StructureManagerInterface, cct.modelling.TrajectoryClientInterface)
            • cct.tools.filebrowser.TransferProgressDialog
            • cct.tools.UserPasswordDialog
            • cct.j3d.ui.VertexObjectsDialog
          • cct.awtdialogs.MessageWindow (implements java.awt.event.ActionListener)
          • cct.database.new_ChemistryDatabaseDialog (implements java.awt.event.ActionListener, java.awt.event.ItemListener, cct.database.TablesDescription)
          • cct.amber.SanderJobControlDialog (implements java.awt.event.ActionListener, java.awt.event.ItemListener)
          • cct.awtdialogs.SelectMethodDialog (implements java.awt.event.ActionListener, java.awt.event.ItemListener)
          • cct.awtdialogs.SimpleAtomSelectionDialog (implements java.awt.event.ActionListener, java.awt.event.ItemListener)
          • cct.awtdialogs.SingleChoiceDialog (implements java.awt.event.ActionListener, java.awt.event.ItemListener)
          • cct.awtdialogs.TextEntryDialog (implements java.awt.event.ActionListener)
          • cct.awtdialogs.YesNoDialog (implements java.awt.event.ActionListener)
        • java.awt.Frame (implements java.awt.MenuContainer)
          • cct.amber.AmberSubmitDialog
          • javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • cct.j3d.AppearanceSetup
            • cct.chart.ChartFrame (implements java.awt.event.ActionListener, cct.chart.ChartInterface, cct.modelling.StructureManagerInterface)
            • cct.modelling.ui.EditAndPasteCoordFrame (implements java.awt.event.ItemListener)
            • cct.modelling.ui.EditAndSaveCoordDialog (implements java.awt.event.ItemListener)
            • cct.tools.filebrowser.FileTransferFrame
            • cct.dialogs.Frame1
            • cct.gaussian.ui.GaussianInputEditorFrame (implements java.awt.event.ActionListener)
            • cct.j3d.ui.GraphicsObjectPropertiesFrame (implements javax.swing.event.TreeSelectionListener)
            • cct.dialogs.JAddFragmentDialog
            • cct.dialogs.JAddMoleculeDialog
            • cct.dialogs.JAtomTypeDialog (implements java.awt.event.ActionListener, java.awt.event.ItemListener)
            • cct.dialogs.JEditorFrame (implements java.awt.event.ActionListener, cct.modelling.AtomProperties, cct.modelling.OperationsOnAtoms, cct.interfaces.ParentInterface, cct.pdb.PDBBankFetcherInterface, cct.tools.filebrowser.ShadowClientInterface)
            • cct.dialogs.JSelectTreeDialog
            • cct.tools.ui.JShowText (implements java.awt.event.ActionListener)
            • cct.tools.ui.LogPanel (implements java.awt.event.ActionListener)
            • cct.gaussian.ui.ManageCubesFrame
            • cct.tools.ui.MemoryMonitorFrame
            • cct.oogl.ui.OOGLViewerFrame
            • cct.pdb.ui.PDBFormFrame (implements java.awt.event.ActionListener)
            • cct.amber.Sander8Frame (implements cct.amber.SanderInputParserInterface)
            • cct.amber.Sander9Frame (implements cct.amber.SanderInputParserInterface)
            • cct.tools.filebrowser.SFTPBrowserFrame (implements java.awt.event.ActionListener)
            • cct.j3d.SimpleRenderer (implements cct.interfaces.GraphicsRendererInterface)
            • cct.grid.ui.gaussian.SubmitGaussianAppl.IOFrame (implements cct.grid.ui.JobOutputInterface)
            • cct.grid.ui.gaussian.SubmitGaussianFrame
            • cct.amber.TextEditorFrame
            • cct.modelling.ui.VibrationsControlFrame
  • cct.Constants
  • cct.modelling.CoordBuilder
  • cct.modelling.CoordParser
  • cct.poly.CORNER
  • cct.poly.CORNERELEMENT
  • cct.tools.Crystal
  • cct.math.Crystal
  • cct.poly.CUBE
  • cct.poly.CUBETABLE
  • org.xml.sax.helpers.DefaultHandler (implements org.xml.sax.ContentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
    • cct.tools.CCTParser
    • cct.tools.FragmentDictionaryParser
    • cct.grid.ParseCheckpointFile.HandleSAXEvents
    • cct.vasp.VasprunXML (implements cct.modelling.StructureManagerInterface)
  • cct.math.DFPMin (implements cct.math.MinimizerInterface)
  • cct.poly.EDGEELEMENT
  • cct.poly.EDGETABLE
  • java.util.EventObject (implements java.io.Serializable)
    • cct.j3d.RenderingObject
  • cct.tools.Experimental
  • cct.tools.Face
  • cct.oogl.Face
  • cct.vecmath.FaceIndices
  • cct.modelling.FFMolecule
  • cct.tools.filebrowser.FileBrowserPanel_deleteButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.tools.filebrowser.FileBrowserPanel_downloadButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.tools.filebrowser.FileBrowserPanel_jComboBox1_actionAdapter (implements java.awt.event.ActionListener)
  • cct.tools.filebrowser.FileBrowserPanel_jComboBox1_itemAdapter (implements java.awt.event.ItemListener)
  • cct.tools.filebrowser.FileBrowserPanel_mkdirButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.tools.filebrowser.FileBrowserPanel_refreshButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.tools.filebrowser.FileBrowserPanel_upButton_actionAdapter (implements java.awt.event.ActionListener)
  • javax.swing.filechooser.FileFilter
    • cct.tools.FileFilterImpl
  • cct.tools.filebrowser.FileName (implements java.lang.Comparable<T>)
  • cct.tools.filebrowser.FileTransferFrame_connectButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.tools.filebrowser.FileTransferFrame_hostsComboBox_actionAdapter (implements java.awt.event.ActionListener)
  • cct.tools.FileUtilities
  • java.awt.event.FocusAdapter (implements java.awt.event.FocusListener)
    • cct.tools.filebrowser.PermissionsPanel_modeTextField_focusAdapter
  • cct.modelling.FormatManager
  • cct.modelling.FormatManager.ParserComparator (implements java.util.Comparator<T>)
  • cct.modelling.FormatManager.ParserScore
  • cct.tools.FortranNamelist
  • cct.dialogs.Frame1_helpButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.Frame1_jMenuFileExit_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.Frame1_jMenuHelpAbout_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.Frame1.testFrame
  • cct.modelling.Frequencies
  • cct.tools.filebrowser.FTPManager (implements cct.interfaces.FTPManagerInterface)
  • cct.gaussian.G03FormCheckpoint
  • cct.gaussian.G03MDTrajectory (implements cct.modelling.StructureManagerInterface)
  • cct.gamess.Gamess
  • cct.gamess.GamessAtom (implements cct.interfaces.Point3fInterface)
  • cct.gamess.GamessOutput
  • cct.gamess.GamessSwitch
  • cct.gaussian.Gaussian (implements cct.gaussian.GJFParserInterface)
  • cct.gaussian.GaussianAtom
  • cct.gaussian.GaussianCube
  • cct.gaussian.GaussianFragment
  • cct.gaussian.GaussianFrequency
  • cct.gaussian.ui.GaussianInputEditorFrame.GaussianInputEditorFrame_insertEntryButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.gaussian.ui.GaussianInputEditorFrame.GaussianInputEditorFrame_jButton6_actionAdapter (implements java.awt.event.ActionListener)
  • cct.gaussian.ui.GaussianInputEditorFrame.GaussianInputEditorFrame_jMenuFileExit_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.gaussian.ui.GaussianInputEditorFrame.GaussianInputEditorFrame_jMenuHelpAbout_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.gaussian.ui.GaussianInputEditorFrame.GaussianInputEditorFrame_jMenuItem1_actionAdapter (implements java.awt.event.ActionListener)
  • cct.gaussian.ui.GaussianInputEditorFrame.GaussianInputEditorFrame_nextStepButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.gaussian.ui.GaussianInputEditorFrame.GaussianInputEditorFrame_openFileButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.gaussian.ui.GaussianInputEditorFrame.GaussianInputEditorFrame_openSelectedFileButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.gaussian.ui.GaussianInputEditorFrame.GaussianInputEditorFrame_previousStepButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.gaussian.ui.GaussianInputEditorFrame.GaussianInputEditorFrame_resetButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.gaussian.ui.GaussianInputEditorFrame.GaussianInputEditorFrame_saveFileButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.gaussian.ui.GaussianInputEditorFrame.GaussianInputEditorFrame_saveStepButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.gaussian.ui.GaussianInputEditorFrame.GaussianInputEditorFrame_stepsComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.gaussian.ui.GaussianInputEditorImpl
  • cct.gaussian.java3d.GaussianJava3dFactory
  • cct.gaussian.GaussianKeywords
  • cct.gaussian.GaussianOutput (implements cct.modelling.MolecularProperties, cct.interfaces.OutputResultsInterface, cct.modelling.StructureManagerInterface)
  • cct.gaussian.GaussianSnapshot
  • cct.cprocessor.GenericAtom
  • cct.cprocessor.GenericBond
  • cct.vecmath.Geometry3d
  • cct.tools.GeomFormat
  • cct.GlobalSettings
  • cct.math.polyg.GLvector
  • cct.tools.GridProviders (implements java.awt.event.ActionListener, cct.grid.FileViewerInterface)
  • cct.gromacs.Gromacs
  • cct.gromacs.GromacsParserFactory
  • cct.j3d.GroupToVRML
  • cct.gulp.Gulp
  • cct.gulp.GULPAtom
  • cct.gulp.GulpMDTrajectory
  • cct.modelling.HarmonicBondStretch
  • cct.resources.images.ImageResources
  • cct.tools.ImageTools
  • cct.poly.ImplicitFunction
  • cct.j3d.InfoPopup (implements java.awt.event.ActionListener)
  • cct.gaussian.InputOrientationParser (implements cct.interfaces.CoordinateParserInterface)
  • java.io.InputStream (implements java.io.Closeable)
    • java.io.FilterInputStream
      • cct.tools.UncompressInputStream
  • cct.tools.IOUtils
  • cct.ssh.J2SSHTest
  • cct.dialogs.JAddFragmentDialog.JAddFragmentDialog_addFragButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JAddFragmentDialog.JAddFragmentDialog_jButton1_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JAddFragmentDialog.JAddFragmentDialog_jTree1_treeSelectionAdapter (implements javax.swing.event.TreeSelectionListener)
  • cct.dialogs.JAddMoleculeDialog_cancelButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JAddMoleculeDialog_jCheckBox1_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JAddMoleculeDialog_jComboBox1_itemAdapter (implements java.awt.event.ItemListener)
  • cct.dialogs.JAddMoleculeDialog_jTextField1_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JAddMoleculeDialog_okButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JAtomSelectionDialog.JAtomSelectionDialog_All_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JAtomSelectionDialog.JAtomSelectionDialog_Cancel_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JAtomSelectionDialog.JAtomSelectionDialog_Clear_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JAtomSelectionDialog.JAtomSelectionDialog_Difference_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JAtomSelectionDialog.JAtomSelectionDialog_Intersection_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JAtomSelectionDialog.JAtomSelectionDialog_Invert_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JAtomSelectionDialog.JAtomSelectionDialog_OK_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JAtomSelectionDialog.JAtomSelectionDialog_typeAtom_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JAtomSelectionDialog.JAtomSelectionDialog_typeMolecule_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JAtomSelectionDialog.JAtomSelectionDialog_typeMonomer_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JAtomSelectionDialog.JAtomSelectionDialog_Union_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.j3d.Java3dUtils
  • cct.help.JavaHelp (implements cct.interfaces.HelperInterface)
  • cct.dialogs.JEditorFrame.AtomColorScheme_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JEditorFrame.JEditorFrame_deleteMoleculeButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JEditorFrame.JEditorFrame_jButton3_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JEditorFrame.JEditorFrame_jMenuAnalyze_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JEditorFrame.JEditorFrame_jMenuDB_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JEditorFrame.JEditorFrame_jMenuFileEdit_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JEditorFrame.JEditorFrame_jMenuFileExit_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JEditorFrame.JEditorFrame_jMenuFileOpenAs_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JEditorFrame.JEditorFrame_jMenuFileSaveAs_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JEditorFrame.JEditorFrame_jMenuHelpAbout_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JEditorFrame.JEditorFrame_jMenuView_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JEditorFrame.JEditorFrame_openFileButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.chart.jfreechart.JFreeChartPanel.DataSet
  • cct.dialogs.JModifyAngleDialog_changeAngle_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyAngleDialog_currentAngle_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyAngleDialog_Finish_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyAngleDialog_Fixed_1_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyAngleDialog_Fixed_2_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyAngleDialog_Fixed_3_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyAngleDialog_Ok_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyAngleDialog_Reset_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyAngleDialog_Rotate_atom_1_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyAngleDialog_Translate_group_1_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyAngleDialog_undoLastSelection_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyAtomDialog_Cancel_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyAtomDialog_Reset_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyAtomDialog_type_1_Button_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyAtomDialog_type_2_Button_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyAtomDialog_type_3_Button_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyAtomDialog_type_4_Button_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyAtomDialog_type_5_Button_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyAtomDialog_type_6_Button_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyAtomDialog_type_7_Button_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyAtomPanel_Blue_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyAtomPanel_Choose_color_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyAtomPanel_Element_itemAdapter (implements java.awt.event.ItemListener)
  • cct.dialogs.JModifyAtomPanel_Green_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyAtomPanel_Red_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyBondDialog_bondLengthSlider_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyBondDialog_Cancel_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyBondDialog_currentBondLength_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyBondDialog_drawBond_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyBondDialog_Fixed_1_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyBondDialog_Fixed_2_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyBondDialog_Ok_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyBondDialog_Reset_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyBondDialog_translateAtom_1_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyBondDialog_translateAtom_2_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyBondDialog_translateGroup_1_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyBondDialog_translateGroup_2_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyBondDialog_undoLastSelection_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyTorsionDialog_angleValue_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyTorsionDialog_changeAngle_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyTorsionDialog_Finish_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyTorsionDialog_Fixed_1_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyTorsionDialog_Fixed_4_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.dialogs.JModifyTorsionDialog_OK_button_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyTorsionDialog_Reset_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JModifyTorsionDialog_Undo_actionAdapter (implements java.awt.event.ActionListener)
  • cct.JMolEditor
  • cct.modelling.JobControl
  • cct.grid.ui.JobStatusDialog_downloadButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.grid.ui.JobStatusDialog_HelpButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.grid.ui.JobStatusDialog_hideButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.grid.ui.JobStatusDialog_killButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.grid.ui.JobStatusDialog_removeButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.grid.ui.JobStatusDialog_updateButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JSelectAtomTypesDialog_Cancel_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JSelectAtomTypesDialog_OK_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JSelectMonomersDialog_Cancel_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JSelectMonomersDialog_Help_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JSelectMonomersDialog_OK_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JSelectSubstructureDialog_Cancel_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JSelectSubstructureDialog_Help_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JSelectSubstructureDialog_OK_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JSelectTreeDialog.JSelectTreeDialog_addFragButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JSelectTreeDialog.JSelectTreeDialog_finishButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JSelectTreeDialog.JSelectTreeDialog_jTree1_treeSelectionAdapter (implements javax.swing.event.TreeSelectionListener)
  • cct.modelling.ui.JSetupEnergyDialog_calculateElsCheckBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.modelling.ui.JSetupEnergyDialog_cancelButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.modelling.ui.JSetupEnergyDialog_forceFieldComboBox_actionAdapter (implements java.awt.event.ActionListener)
  • cct.modelling.ui.JSetupEnergyDialog_helpButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.modelling.ui.JSetupEnergyDialog_ignoreAtomsCheckBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.modelling.ui.JSetupEnergyDialog_nbCutoffCheckBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.modelling.ui.JSetupEnergyDialog_nbCutoffTextField_actionAdapter (implements java.awt.event.ActionListener)
  • cct.tools.ui.JShowText.JShowText_jButton1_actionAdapter (implements java.awt.event.ActionListener)
  • cct.tools.ui.JShowText.JShowText_saveAsMenuItem_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JSolvateShellDialog_browseButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.dialogs.JSolvateShellDialog_predefinedRadioButton_itemAdapter (implements java.awt.event.ItemListener)
  • cct.dialogs.JSolvateShellDialog.JSolvateShellDialog_jTextField1_actionAdapter (implements java.awt.event.ActionListener)
  • cct.ssh.KBIConnect
  • java.awt.event.KeyAdapter (implements java.awt.event.KeyListener)
    • cct.tools.UserPasswordDialog_cancelButton_keyAdapter
    • cct.tools.UserPasswordDialog_jPasswordField1_keyAdapter
    • cct.tools.UserPasswordDialog_okButton_keyAdapter
    • cct.tools.UserPasswordDialog_this_keyAdapter
  • cct.math.LinearSearch
  • cct.tools.filebrowser.LocalFileBrowser (implements cct.interfaces.FileBrowserInterface)
  • cct.grid.LocalServiceProvider (implements cct.grid.GridProviderInterface)
  • cct.tools.ui.LogPanel_hideMenuItem_actionAdapter (implements java.awt.event.ActionListener)
  • cct.tools.ui.LogPanel_jTextArea1_caretAdapter (implements javax.swing.event.CaretListener)
  • cct.tools.ui.LogPanel_saveAsMenuItem_actionAdapter (implements java.awt.event.ActionListener)
  • cct.cprocessor.MacroProcessor (implements cct.cprocessor.MacroProcessorInterface)
  • cct.gaussian.ui.ManageCubesFrame_mappedSurfaceButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.math.MathExpressionParser
  • cct.vecmath.MeshObject
  • cct.tools.MessagePost
  • cct.math.Minimizer
  • cct.modelling.MinimizeStructure
  • cct.modelling.MolecularEditor (implements cct.modelling.OperationsOnAtoms)
    • cct.j3d.Java3dUniverse (implements java.awt.event.ActionListener, cct.interfaces.GraphicsRendererInterface, cct.modelling.MolecularProperties, cct.interfaces.MoleculeRendererInterface, cct.modelling.OperationsOnAtoms, cct.interfaces.TreeSelectorInterface)
  • cct.modelling.MolecularEnergy (implements cct.math.MinimizedFunctionInterface)
  • cct.modelling.MolecularFileFormats
  • cct.modelling.Molecule (implements cct.modelling.AtomProperties, cct.interfaces.MoleculeInterface)
  • cct.mopac.Mopac
  • cct.mopac.MopacAtom
  • cct.mopac.MopacOutput
  • java.awt.event.MouseAdapter (implements java.awt.event.MouseListener)
    • cct.gaussian.ui.Link0Panel_jTextArea1_mouseAdapter
    • cct.gaussian.ui.MoleculeSpecsPanel_jTextArea1_mouseAdapter
    • cct.tools.ui.PostMessagePanel.MyMouseAdapter
    • cct.gaussian.ui.RouteSectionPanel_jTextArea1_mouseAdapter
    • cct.amber.Sander8Frame_BELLYMASK_Label_mouseAdapter
    • cct.amber.Sander8Frame_COMP_Label_mouseAdapter
    • cct.amber.Sander8Frame_covergLabel_mouseAdapter
    • cct.amber.Sander8Frame_CUT_Label_mouseAdapter
    • cct.amber.Sander8Frame_DIELC_Label_mouseAdapter
    • cct.amber.Sander8Frame_DT_Label_mouseAdapter
    • cct.amber.Sander8Frame_dxLabel_mouseAdapter
    • cct.amber.Sander8Frame_EXTDIEL_Label_mouseAdapter
    • cct.amber.Sander8Frame_FCAP_Label_mouseAdapter
    • cct.amber.Sander8Frame_GAMMA_LN_Label_mouseAdapter
    • cct.amber.Sander8Frame_GBSA_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_GBSA_Label_mouseAdapter
    • cct.amber.Sander8Frame_HWTNM1_Label_mouseAdapter
    • cct.amber.Sander8Frame_HWTNM2_Label_mouseAdapter
    • cct.amber.Sander8Frame_IBELLY_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_IBELLY_Label_mouseAdapter
    • cct.amber.Sander8Frame_IDECOMP_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_IDECOMP_Label_mouseAdapter
    • cct.amber.Sander8Frame_IG_Label_mouseAdapter
    • cct.amber.Sander8Frame_IGB_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_IMIN_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_INTDIEL_Label_mouseAdapter
    • cct.amber.Sander8Frame_IOUTFM_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_IOUTFM_Label_mouseAdapter
    • cct.amber.Sander8Frame_IPOL_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_IPOL_Label_mouseAdapter
    • cct.amber.Sander8Frame_IREST_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_IVCAP_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_IVCAP_Label_mouseAdapter
    • cct.amber.Sander8Frame_IWRAP_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_IWRAP_Label_mouseAdapter
    • cct.amber.Sander8Frame_JFASTW_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_JFASTW_Label_mouseAdapter
    • cct.amber.Sander8Frame_jLabel10_mouseAdapter
    • cct.amber.Sander8Frame_maxIterLabel_mouseAdapter
    • cct.amber.Sander8Frame_NRESPA_Label_mouseAdapter
    • cct.amber.Sander8Frame_NSNB_Label_mouseAdapter
    • cct.amber.Sander8Frame_NSTLIM_Label_mouseAdapter
    • cct.amber.Sander8Frame_NTAVE_Label_mouseAdapter
    • cct.amber.Sander8Frame_NTB_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_NTB_Label_mouseAdapter
    • cct.amber.Sander8Frame_NTC_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_NTC_Label_mouseAdapter
    • cct.amber.Sander8Frame_NTF_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_NTF_Label_mouseAdapter
    • cct.amber.Sander8Frame_NTMIN_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_NTP_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_NTP_Label_mouseAdapter
    • cct.amber.Sander8Frame_NTPR_Label_mouseAdapter
    • cct.amber.Sander8Frame_NTR_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_NTR_Label_mouseAdapter
    • cct.amber.Sander8Frame_NTRX_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_NTRX_Label_mouseAdapter
    • cct.amber.Sander8Frame_NTT_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_NTT_Label_mouseAdapter
    • cct.amber.Sander8Frame_NTWE_Label_mouseAdapter
    • cct.amber.Sander8Frame_NTWPRT_Label_mouseAdapter
    • cct.amber.Sander8Frame_NTWR_Label_mouseAdapter
    • cct.amber.Sander8Frame_NTWV_Label_mouseAdapter
    • cct.amber.Sander8Frame_NTWX_Label_mouseAdapter
    • cct.amber.Sander8Frame_NTX_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_NTX_Label_mouseAdapter
    • cct.amber.Sander8Frame_NTXO_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_NTXO_Label_mouseAdapter
    • cct.amber.Sander8Frame_OFFSET_Label_mouseAdapter
    • cct.amber.Sander8Frame_OWTNM_Label_mouseAdapter
    • cct.amber.Sander8Frame_PRES0_Label_mouseAdapter
    • cct.amber.Sander8Frame_RBORNSTAT_ComboBox_mouseAdapter
    • cct.amber.Sander8Frame_RBORNSTAT_Label_mouseAdapter
    • cct.amber.Sander8Frame_RDT_Label_mouseAdapter
    • cct.amber.Sander8Frame_RESTRAINT_WT_Label_mouseAdapter
    • cct.amber.Sander8Frame_RESTRAINTMASK_Label_mouseAdapter
    • cct.amber.Sander8Frame_RGBMAX_Label_mouseAdapter
    • cct.amber.Sander8Frame_SALTCON_Label_mouseAdapter
    • cct.amber.Sander8Frame_SCEE_Label_mouseAdapter
    • cct.amber.Sander8Frame_SCNB_Label_mouseAdapter
    • cct.amber.Sander8Frame_SURFTEN_Label_mouseAdapter
    • cct.amber.Sander8Frame_switchLabel_mouseAdapter
    • cct.amber.Sander8Frame_T_Label_mouseAdapter
    • cct.amber.Sander8Frame_TAUP_Label_mouseAdapter
    • cct.amber.Sander8Frame_TAUTP_Label_mouseAdapter
    • cct.amber.Sander8Frame_TEMP0_Label_mouseAdapter
    • cct.amber.Sander8Frame_TEMP0LES_Label_mouseAdapter
    • cct.amber.Sander8Frame_TEMPI_Label_mouseAdapter
    • cct.amber.Sander8Frame_TOL_Label_mouseAdapter
    • cct.amber.Sander8Frame_VLIMIT_Label_mouseAdapter
    • cct.amber.Sander8Frame_VRAND_Label_mouseAdapter
    • cct.amber.Sander8Frame_WATNAM_Label_mouseAdapter
    • cct.amber.Sander9Frame_BELLYMASK_Label_mouseAdapter
    • cct.amber.Sander9Frame_COMP_Label_mouseAdapter
    • cct.amber.Sander9Frame_covergLabel_mouseAdapter
    • cct.amber.Sander9Frame_CUT_Label_mouseAdapter
    • cct.amber.Sander9Frame_DIELC_Label_mouseAdapter
    • cct.amber.Sander9Frame_DT_Label_mouseAdapter
    • cct.amber.Sander9Frame_dxLabel_mouseAdapter
    • cct.amber.Sander9Frame_EXTDIEL_Label_mouseAdapter
    • cct.amber.Sander9Frame_FCAP_Label_mouseAdapter
    • cct.amber.Sander9Frame_GAMMA_LN_Label_mouseAdapter
    • cct.amber.Sander9Frame_GBSA_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_GBSA_Label_mouseAdapter
    • cct.amber.Sander9Frame_HWTNM1_Label_mouseAdapter
    • cct.amber.Sander9Frame_HWTNM2_Label_mouseAdapter
    • cct.amber.Sander9Frame_IBELLY_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_IBELLY_Label_mouseAdapter
    • cct.amber.Sander9Frame_IDECOMP_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_IDECOMP_Label_mouseAdapter
    • cct.amber.Sander9Frame_IG_Label_mouseAdapter
    • cct.amber.Sander9Frame_IGB_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_IMIN_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_INTDIEL_Label_mouseAdapter
    • cct.amber.Sander9Frame_IOUTFM_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_IOUTFM_Label_mouseAdapter
    • cct.amber.Sander9Frame_IPOL_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_IPOL_Label_mouseAdapter
    • cct.amber.Sander9Frame_IREST_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_IVCAP_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_IVCAP_Label_mouseAdapter
    • cct.amber.Sander9Frame_IWRAP_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_IWRAP_Label_mouseAdapter
    • cct.amber.Sander9Frame_JFASTW_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_JFASTW_Label_mouseAdapter
    • cct.amber.Sander9Frame_jLabel10_mouseAdapter
    • cct.amber.Sander9Frame_maxIterLabel_mouseAdapter
    • cct.amber.Sander9Frame_NRESPA_Label_mouseAdapter
    • cct.amber.Sander9Frame_NSNB_Label_mouseAdapter
    • cct.amber.Sander9Frame_NSTLIM_Label_mouseAdapter
    • cct.amber.Sander9Frame_NTAVE_Label_mouseAdapter
    • cct.amber.Sander9Frame_NTB_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_NTB_Label_mouseAdapter
    • cct.amber.Sander9Frame_NTC_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_NTC_Label_mouseAdapter
    • cct.amber.Sander9Frame_NTF_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_NTF_Label_mouseAdapter
    • cct.amber.Sander9Frame_NTMIN_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_NTP_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_NTP_Label_mouseAdapter
    • cct.amber.Sander9Frame_NTPR_Label_mouseAdapter
    • cct.amber.Sander9Frame_NTR_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_NTR_Label_mouseAdapter
    • cct.amber.Sander9Frame_NTRX_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_NTRX_Label_mouseAdapter
    • cct.amber.Sander9Frame_NTT_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_NTT_Label_mouseAdapter
    • cct.amber.Sander9Frame_NTWE_Label_mouseAdapter
    • cct.amber.Sander9Frame_NTWPRT_Label_mouseAdapter
    • cct.amber.Sander9Frame_NTWR_Label_mouseAdapter
    • cct.amber.Sander9Frame_NTWV_Label_mouseAdapter
    • cct.amber.Sander9Frame_NTWX_Label_mouseAdapter
    • cct.amber.Sander9Frame_NTX_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_NTX_Label_mouseAdapter
    • cct.amber.Sander9Frame_NTXO_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_NTXO_Label_mouseAdapter
    • cct.amber.Sander9Frame_OFFSET_Label_mouseAdapter
    • cct.amber.Sander9Frame_OWTNM_Label_mouseAdapter
    • cct.amber.Sander9Frame_PRES0_Label_mouseAdapter
    • cct.amber.Sander9Frame_RBORNSTAT_ComboBox_mouseAdapter
    • cct.amber.Sander9Frame_RBORNSTAT_Label_mouseAdapter
    • cct.amber.Sander9Frame_RDT_Label_mouseAdapter
    • cct.amber.Sander9Frame_RESTRAINT_WT_Label_mouseAdapter
    • cct.amber.Sander9Frame_RESTRAINTMASK_Label_mouseAdapter
    • cct.amber.Sander9Frame_RGBMAX_Label_mouseAdapter
    • cct.amber.Sander9Frame_SALTCON_Label_mouseAdapter
    • cct.amber.Sander9Frame_SCEE_Label_mouseAdapter
    • cct.amber.Sander9Frame_SCNB_Label_mouseAdapter
    • cct.amber.Sander9Frame_SURFTEN_Label_mouseAdapter
    • cct.amber.Sander9Frame_switchLabel_mouseAdapter
    • cct.amber.Sander9Frame_T_Label_mouseAdapter
    • cct.amber.Sander9Frame_TAUP_Label_mouseAdapter
    • cct.amber.Sander9Frame_TAUTP_Label_mouseAdapter
    • cct.amber.Sander9Frame_TEMP0_Label_mouseAdapter
    • cct.amber.Sander9Frame_TEMP0LES_Label_mouseAdapter
    • cct.amber.Sander9Frame_TEMPI_Label_mouseAdapter
    • cct.amber.Sander9Frame_TOL_Label_mouseAdapter
    • cct.amber.Sander9Frame_VLIMIT_Label_mouseAdapter
    • cct.amber.Sander9Frame_VRAND_Label_mouseAdapter
    • cct.amber.Sander9Frame_WATNAM_Label_mouseAdapter
    • cct.tools.filebrowser.SFTPBrowser (implements java.awt.event.ActionListener, cct.interfaces.FileBrowserInterface, javax.swing.event.ListSelectionListener)
  • cct.j3d.MyMouseListener (implements java.awt.event.MouseListener)
  • cct.j3d.MyMouseMotionListener (implements java.awt.event.ActionListener, java.awt.event.MouseMotionListener)
  • cct.database.new_SQLChemistryDatabase (implements cct.modelling.MolecularProperties, cct.database.TablesDescription)
  • cct.modelling.Nonbonded15Table
  • cct.modelling.NonbondedEnergy
  • cct.modelling.NonbondedPair
  • java.lang.Number (implements java.io.Serializable)
    • cct.tools.filebrowser.FileSize (implements java.lang.Comparable<T>, java.io.Serializable)
  • cct.tools.OOGL
  • cct.oogl.OOGL
  • cct.oogl.java3d.OoglJava3d
  • cct.oogl.ui.OOGLViewerFrame_jMenuFileExit_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.oogl.ui.OOGLViewerFrame_jMenuHelpAbout_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.modelling.ui.OpenFile (implements java.awt.event.ActionListener)
  • java.io.OutputStream (implements java.io.Closeable, java.io.Flushable)
    • cct.tools.ui.JTextAreaOutputStream
  • cct.grid.ParseCheckpointFile
  • cct.modelling.ParseTriposMol2 (implements cct.modelling.AtomProperties)
  • cct.ssh.PasswordConnect
  • cct.grid.ui.PBS_Panel_ProjectTextField_actionAdapter (implements java.awt.event.ActionListener)
  • cct.grid.PBSJobStatus
  • cct.pdb.PDB (implements cct.interfaces.CoordinateParserInterface)
  • cct.pdb.PDBAtom
  • cct.pdb.PDBBond
  • cct.pdb.PDBDictionary
  • cct.pdb.PDBResidue
  • cct.tools.filebrowser.PermissionsPanel_modeTextField_actionAdapter (implements java.awt.event.ActionListener)
  • cct.poly.POINT
    • cct.poly.NORMAL
    • cct.poly.VERTEX
  • cct.math.PointGroup
  • cct.poly.Polygonizer
  • cct.math.polyg.Polygonizer
    • cct.math.polyg.java3d.j3dPolygonizer
  • cct.ssh.PortForwarding
  • cct.povray.Povray
    • cct.j3d.PovrayJava3d
  • cct.poly.PROCESS
  • cct.ssh.PublicKeyConnect
  • cct.qchem.QChem
  • cct.qchem.QChemAtom
  • cct.qchem.QChemOutput
  • cct.j3d.QueryProperties
  • cct.amber.ReadPrmtopDialog_browsePrmtopButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.ReadPrmtopDialog_cancelButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.ReadPrmtopDialog_coordButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.ReadPrmtopDialog_helpButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.ReadPrmtopDialog_loadButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.resources.Resources
  • cct.amber.Sander8Frame_DRMS_TextField_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander8Frame_DX0_TextField_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander8Frame_Edit_MenuItem_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander8Frame_GBSA_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_IBELLY_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_IDECOMP_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_IGB_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_IMIN_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_IOUTFM_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_IPOL_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_IREST_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_IVCAP_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_IWRAP_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_jButton1_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander8Frame_jButton2_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander8Frame_jButton3_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander8Frame_JFASTW_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_jMenuFileExit_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander8Frame_jMenuHelpAbout_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander8Frame_jMenuItem1_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander8Frame_jMenuItem2_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander8Frame_MAXCYC_TextField_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander8Frame_NCYC_TextField_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander8Frame_NSTLIM_TextField_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander8Frame_NTB_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_NTC_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_NTF_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_NTMIN_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_NTP_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_NTR_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_NTRX_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_NTT_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_NTX_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_NTXO_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_RBORNSTAT_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander8Frame_saveFile_Button_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander8JobControl
  • cct.amber.Sander8Start
  • cct.amber.Sander8Variable
  • cct.amber.Sander8VariableValue
  • cct.amber.Sander9Frame_DRMS_TextField_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander9Frame_DX0_TextField_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander9Frame_Edit_MenuItem_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander9Frame_GBSA_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_IBELLY_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_IDECOMP_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_IGB_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_IMIN_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_IOUTFM_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_IPOL_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_IREST_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_IVCAP_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_IWRAP_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_jButton1_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander9Frame_jButton2_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander9Frame_jButton3_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander9Frame_JFASTW_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_jMenuFileExit_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander9Frame_jMenuHelpAbout_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander9Frame_jMenuItem1_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander9Frame_jMenuItem2_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander9Frame_MAXCYC_TextField_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander9Frame_NCYC_TextField_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander9Frame_NSTLIM_TextField_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander9Frame_NTB_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_NTC_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_NTF_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_NTMIN_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_NTP_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_NTR_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_NTRX_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_NTT_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_NTX_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_NTXO_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_RBORNSTAT_ComboBox_itemAdapter (implements java.awt.event.ItemListener)
  • cct.amber.Sander9Frame_saveFile_Button_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.Sander9JobControl
  • cct.amber.SanderResourcesEval
  • cct.amber.SanderVariable
  • cct.amber.SanderVariableValue
  • cct.gaussian.ui.SaveG03GJFDialog.SaveG03GJFDialog_cancelButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.gaussian.ui.SaveG03GJFDialog.SaveG03GJFDialog_saveButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.modelling.SaveGJF
  • javax.media.j3d.SceneGraphObject
    • javax.media.j3d.Node
      • javax.media.j3d.Group
        • javax.media.j3d.BranchGroup
          • cct.j3d.ArrowNode
          • cct.j3d.AtomNode (implements java.lang.Cloneable)
          • cct.j3d.BondNode (implements java.lang.Cloneable)
          • cct.j3d.LabelNode
      • javax.media.j3d.Leaf
        • javax.media.j3d.Behavior
          • cct.j3d.KeyHandler
          • com.sun.j3d.utils.behaviors.keyboard.KeyNavigatorBehavior (implements java.awt.event.KeyListener)
            • cct.j3d.myKeyNavigatorBehavior
          • com.sun.j3d.utils.behaviors.mouse.MouseBehavior (implements java.awt.event.MouseListener, java.awt.event.MouseMotionListener, java.awt.event.MouseWheelListener)
            • com.sun.j3d.utils.behaviors.mouse.MouseRotate
              • cct.j3d.MyMouseRotate
            • com.sun.j3d.utils.behaviors.mouse.MouseZoom
              • cct.j3d.MyMouseZoom
          • com.sun.j3d.utils.picking.behaviors.PickMouseBehavior
            • cct.j3d.MousePicking (implements com.sun.j3d.utils.behaviors.mouse.MouseBehaviorCallback, cct.modelling.OperationsOnAtoms)
            • cct.j3d.MousePickingHandler
  • cct.j3d.ScriptProcessorWrapper (implements cct.cprocessor.MolProcessorInterface)
  • cct.mdl.SDCompound
  • cct.mdl.SDF
  • cct.vecmath.Segment3f
  • cct.tools.ui.SelectFromListDialog_helpButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.ssh.SftpConnect
  • cct.ssh.SFTPFileStaging
  • cct.tools.filebrowser.SFTPObject
  • cct.tools.filebrowser.ShadowSFTPManager (implements cct.tools.filebrowser.ShadowManagerInterface)
  • cct.siesta.Siesta
  • cct.siesta.SiestaInput (implements cct.siesta.SiestaInterface)
  • cct.siesta.SiestaInput.SiestaAtom
  • cct.sff.SimpleForceField (implements cct.interfaces.ForceFieldInterface)
  • cct.gaussian.ui.SimpleG03EditorPanel_validateGeomButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.tools.SimpleParserFactory
  • cct.math.Simplex
  • cct.modelling.SingleTrajectory
  • cct.database.SQLChemistryDatabase
  • cct.database.SQLDatabaseAccess (implements cct.database.DatabaseAccess)
  • cct.ssh.SSHServiceProvider (implements cct.grid.GridProviderInterface)
  • cct.modelling.StructureManager
  • cct.grid.ui.gaussian.SubmitGaussianAppl (implements java.awt.event.ActionListener)
  • cct.grid.ui.gaussian.SubmitGaussianDialog_Cancel_Button_actionAdapter (implements java.awt.event.ActionListener)
  • cct.grid.ui.gaussian.SubmitGaussianDialog_getProxy_Button_actionAdapter (implements java.awt.event.ActionListener)
  • cct.grid.ui.gaussian.SubmitGaussianDialog_providerComboBox_actionAdapter (implements java.awt.event.ActionListener)
  • cct.grid.ui.gaussian.SubmitGaussianDialog_Submit_Button_actionAdapter (implements java.awt.event.ActionListener)
  • cct.grid.ui.gaussian.SubmitGaussianDialogNew_Cancel_Button_actionAdapter (implements java.awt.event.ActionListener)
  • cct.grid.ui.gaussian.SubmitGaussianDialogNew_providerComboBox_actionAdapter (implements java.awt.event.ActionListener)
  • cct.grid.ui.gaussian.SubmitGaussianDialogNew_Submit_Button_actionAdapter (implements java.awt.event.ActionListener)
  • cct.grid.ui.gaussian.SubmitGaussianFrame_jMenuFileExit_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.grid.ui.gaussian.SubmitGaussianFrame_jMenuHelpAbout_ActionAdapter (implements java.awt.event.ActionListener)
  • cct.j3d.SuperCell (implements cct.interfaces.CellViewManagerInterface)
  • cct.j3d.SuperCell.CellObject
  • cct.j3d.SuperCell.SuperCube
  • cct.tools.SwingLookAndFeel
  • cct.tools.SwingWorker
    • cct.modelling.BackgroundMinimizer (implements cct.interfaces.MinimizeProgressInterface)
    • cct.tools.filebrowser.SFTPBrowser.FileTranferWorker (implements com.sshtools.j2ssh.FileTransferProgress)
    • cct.tools.filebrowser.SFTPFileChooserDialog.FileTranferWorker (implements com.sshtools.j2ssh.FileTransferProgress)
  • cct.grid.TaskProvider
  • cct.grid.TaskProviderPanel_providerComboBox_actionAdapter (implements java.awt.event.ActionListener)
  • cct.grid.TaskScheduler
  • cct.poly.TEST
  • cct.testStarter
  • cct.tools.TextClipboard (implements java.awt.datatransfer.ClipboardOwner)
  • cct.amber.TextEditorFrame_jMenuItem1_actionAdapter (implements java.awt.event.ActionListener)
  • cct.amber.TextEditorFrame_jMenuItem2_actionAdapter (implements java.awt.event.ActionListener)
  • cct.tools.ui.TextToPost (implements java.awt.event.ActionListener)
  • java.lang.Thread (implements java.lang.Runnable)
    • cct.grid.ui.JobStatusDialog.Task
    • cct.grid.ui.gaussian.SubmitGaussianDialog.Task
    • cct.grid.ui.gaussian.SubmitGaussianDialogNew.Task
    • cct.grid.ui.SubmitTaskDialog.Task
    • cct.grid.ui.ThreadExec
  • cct.grid.ui.ThreadExec.TimerListener (implements java.awt.event.ActionListener)
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • cct.grid.MalformedCheckPointException
  • java.util.TimerTask (implements java.lang.Runnable)
    • cct.grid.ui.gaussian.SubmitGaussianDialog.JobSubProgress
    • cct.grid.ui.gaussian.SubmitGaussianDialogNew.JobSubProgress
    • cct.grid.ui.SubmitTaskDialog.JobSubProgress
  • cct.modelling.Torsion
  • cct.modelling.TorsionEnergy
  • cct.modelling.TorsionParameter
  • cct.modelling.TorsionTerm
  • cct.poly.Torus (implements cct.interfaces.ImplicitFunctionInterface)
  • cct.modelling.TrajectorySnapshot
  • cct.poly.TRIANGLE
  • cct.tripos.Tripos
  • cct.tripos.TriposParser (implements cct.modelling.AtomProperties)
  • cct.j3d.UnitCellGraphics
  • cct.tools.filebrowser.UserHostInfo
  • cct.tools.UserPasswordDialog.UserPasswordDialog_cancelButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.tools.UserPasswordDialog.UserPasswordDialog_jPasswordField1_actionAdapter (implements java.awt.event.ActionListener)
  • cct.tools.UserPasswordDialog.UserPasswordDialog_jTextField1_actionAdapter (implements java.awt.event.ActionListener)
  • cct.tools.UserPasswordDialog.UserPasswordDialog_okButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.tools.Utils
  • cct.vasp.Vasp
  • cct.vasp.VaspAtom
  • cct.vasp.VaspSnapshot
  • cct.vecmath.VecmathTools
  • cct.j3d.VerticesObject (implements cct.interfaces.GraphicsObjectInterface)
  • cct.j3d.VerticesObjectProperties
  • cct.j3d.ui.VerticesPropertyPanel_shininessSlider_changeAdapter (implements javax.swing.event.ChangeListener)
  • cct.chart.VibrationSpectrumChart
  • cct.j3d.VibrationsRenderer (implements cct.j3d.RenderingListener, cct.interfaces.VibrationsRendererProvider)
  • cct.j3d.VibrationsRenderer.DVObject
  • cct.dialogs.ViewPeriodicImagePanel_resetButton_actionAdapter (implements java.awt.event.ActionListener)
  • cct.gaussian.java3d.VolumetricData (implements cct.interfaces.ImplicitFunctionInterface)
  • cct.vecmath.vPoint3f (implements cct.interfaces.Point3fInterface)
    • cct.amber.AmberPrepAtom
    • cct.modelling.vAtom (implements cct.interfaces.AtomInterface)
      • cct.modelling.gAtom (implements cct.interfaces.AtomInterface)
  • java.awt.event.WindowAdapter (implements java.awt.event.WindowFocusListener, java.awt.event.WindowListener, java.awt.event.WindowStateListener)
    • cct.tools.ui.MemoryMonitorFrame_this_windowAdapter
  • cct.tools.XMolXYZ (implements cct.interfaces.CoordinateBuilderInterface, cct.interfaces.CoordinateParserInterface)

Interface Hierarchy

• cct.modelling.AtomProperties
• cct.interfaces.BondInterface
• cct.interfaces.CellViewManagerInterface
• cct.chart.ChartInterface
• cct.grid.CheckPointInterface
• cct.grid.ClientProgramInterface
• java.lang.Cloneable
  • cct.interfaces.AtomInterface (also extends cct.interfaces.Point3fInterface)
• cct.interfaces.CoordinateBuilderInterface
• cct.interfaces.CoordinateParserInterface
• cct.database.DatabaseAccess
• java.util.EventListener
  • cct.j3d.RenderingListener
• cct.interfaces.FileBrowserGUIInterface
• cct.interfaces.FileBrowserInterface
• cct.interfaces.FileChooserInterface
• cct.grid.FileTransferInterface
• cct.grid.FileViewerInterface
• cct.interfaces.ForceFieldInterface
• cct.interfaces.FTPManagerInterface
• cct.gaussian.GJFParserInterface
• cct.interfaces.GraphicsObjectInterface
• cct.interfaces.GraphicsRendererInterface
• cct.grid.GridProviderInterface
• cct.interfaces.HelperInterface
• cct.poly.ImplicitFunctionInterface
• cct.interfaces.ImplicitFunctionInterface
• cct.grid.ui.JobOutputInterface
• cct.grid.JobStatusInterface
• cct.cprocessor.MacroProcessorInterface
• cct.j3d.ui.MappedSurfaceInterface
• cct.math.MinimizedFunctionInterface
• cct.interfaces.MinimizeProgressInterface
• cct.math.MinimizerInterface
• cct.modelling.MolecularProperties
• cct.interfaces.MoleculeInterface
• cct.interfaces.MoleculeRendererInterface
• cct.cprocessor.MolProcessorInterface
• cct.interfaces.MonomerInterface
• cct.modelling.OperationsOnAtoms
• cct.interfaces.OutputResultsInterface
• cct.interfaces.ParentInterface
• cct.pdb.PDBBankFetcherInterface
• cct.interfaces.Point3fInterface
  • cct.interfaces.AtomInterface (also extends java.lang.Cloneable)
• cct.grid.ResourcesProviderInterface
• cct.amber.SanderInputParserInterface
• cct.grid.SchedulerInterface
• cct.grid.ScriptSubmitterDialogInterface
• cct.tools.filebrowser.SelectionInfoInterface
• cct.tools.filebrowser.ShadowClientInterface
• cct.tools.filebrowser.ShadowManagerInterface
• cct.siesta.SiestaInterface
• cct.modelling.StructureManagerInterface
• cct.database.TablesDescription
• cct.grid.TaskProviderInterface
• cct.grid.ui.ThreadInterface
• cct.modelling.TrajectoryClientInterface
• cct.interfaces.TreeSelectorInterface
• cct.interfaces.VibrationsRendererProvider
• cct.interfaces.VolumetricDataInterface

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • cct.amber.LIB_ENTRY
    • cct.dialogs.ELEMENTS_PRESENTATION
    • cct.grid.OperationalSystems
    • cct.cprocessor.SelectCommandObjects
    • cct.cprocessor.EraseCommandObject
    • cct.cprocessor.RenderCommandObject
    • cct.cprocessor.Commands
    • cct.cprocessor.CommandObject
    • cct.cprocessor.AddCommandObjects
    • cct.tools.PostMessageType
    • cct.tools.GraphicsFormat
    • cct.tools.filebrowser.FTP_OBJECT
    • cct.adf.KEY_WORDS
    • cct.gulp.GULP_KEY_WORDS
    • cct.j3d.PROCESS_SELECTED_ATOMS
    • cct.j3d.USER_DATA_FLAG
    • cct.gaussian.Link0_Commands
    • cct.gaussian.G03_CHECKPOINT_KEY_WORDS
    • cct.gaussian.TYPE
    • cct.gaussian.ONIOM_LAYER
    • cct.math.SEPARATOR
    • cct.math.PARANTHESIS
    • cct.math.OPERATION
    • cct.math.PREDEFINED_FUNCTION
    • cct.math.TYPE
    • cct.oogl.PARSE_STATUS
    • cct.vasp.WhatToParse
    • cct.vasp.VasprunTags
    • cct.pdb.MONOMER_TYPE
    • cct.modelling.VIBRATIONAL_SPECTRUM_CURVE
    • cct.modelling.VIBRATIONAL_SPECTRUM
    • cct.modelling.TRAJECTORY_FILE_FORMAT
    • cct.modelling.CHEMISTRY_FILE_FORMAT
    • cct.modelling.CELL_PARAMETER
    • cct.modelling.ui.OPEN_FILE_MODE
    • cct.siesta.AtomicCoordinatesFormat